2HRL structure in UniLectin3D

Mol* PDB structure viewer

Select a PDB entry:

Fold

Class

Family

Resolution (Å)

Origin

Species

Comments

Attrill H, Imamura A, Sharma RS, Kiso M, Crocker PR, van Aalten DM Siglec-7 undergoes a major conformational change when complexed with the alpha2,8-disialylganglioside GT1b. J. Biol. Chem. 2006

Matching protein

Q9Y286 in UniLectin

Available structures

1NKO : no ligand
1O7S : no ligand
1O7V : no ligand
2DF3 : aNeuAc23bGal13(aNeuAc26)GlcNAc
2G5R : Oxamido-NeuAc
2HRL : 2,8-disialoganglioside GT1b

Related proteins
> 50% identity

Ligand

Glycan composition

IUPAC condensed

GlycoCT

RES
1b:x-dglc-HEX-1:5
2b:b-dgal-HEX-1:5
3b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d
4s:n-acetyl
5b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d
6s:n-acetyl
7b:b-dgal-HEX-1:5
8s:n-acetyl
LIN
1:1o(4+1)2d
2:2o(3+2)3d
3:3d(5+1)4n
4:3o(8+2)5d
5:5d(5+1)6n
6:2o(4+1)7d
7:7d(2+1)8n

PubMed DOI RCSB.ORG PDBeGlyTouCan (glycan information)SwissModel (ligand interactions)Glyconnect and SugarBind glycan superstructure(s)Uniprot

Pictures

SWISS MODEL PLIP INTERACTIONS VIEWER

PDBe SEQ viewer

PDBe Topology viewer

How to cite

How to cite: