3NXD structure in UniLectin3D

Mol* PDB structure viewer

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Comments

Human JC polyomavirus complexed with LSTc

Neu U, Maginnis MS, Palma AS, Stroeh LJ, Nelson CD, Feizi T, Atwood WJ, Stehle T. Structure-function analysis of the human JC polyomavirus establishes the LSTc pentasaccharide as a functional receptor motif. Cell Host Microbe 2010

Matching protein

P03089 in UniLectin

Available structures

3NXD : aNeuAc26bGal14bGlcNAc13bGal14G
3NXG : no ligand
4JCD : no ligand
4JCE : no ligand
4JCF : aNeuAc26bGal14bGlcNAc
4X14 : no ligand
4X15 : no ligand
4X16 : no ligand

Related proteins
> 50% identity

Ligand

Glycan composition

IUPAC condensed

GlycoCT

RES
1b:x-dglc-HEX-1:5
2b:b-dgal-HEX-1:5
3b:b-dglc-HEX-1:5
4s:n-acetyl
5b:b-dgal-HEX-1:5
6b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d
7s:n-acetyl
LIN
1:1o(4+1)2d
2:2o(3+1)3d
3:3d(2+1)4n
4:3o(4+1)5d
5:5o(6+2)6d
6:6d(5+1)7n

PubMed DOI RCSB.ORG PDBeGlyTouCan (glycan information)SwissModel (ligand interactions)Glyconnect and SugarBind glycan superstructure(s)Uniprot Sugarbind lectin

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