5CPW structure in UniLectin3D

Mol* PDB structure viewer

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Comments

Buch M, Liaci A, O Hara S, Garcea R, Neu U, Stehle T. Structural and Functional Analysis of Murine Polyomavirus Capsid Proteins Establish the Determinants of Ligand Recognition and Pathogenicity. PLoS pathogens 2015

Matching protein

P49302 in UniLectin

Available structures

1SID : aNeuAc23bGal14Glc
1SIE : aNeuAc23bGal13(aNeuAc26)GlcNAc
1VPN : no ligand
1VPS : aNeuAc23bGal13(aNeuAc26)GlcNAc
5CPU : no ligand
5CPW : no ligand
5CPX : no ligand
5CPY : no ligand
5CPZ : no ligand
5CQ0 : no ligand

Related proteins
> 50% identity

Ligand

Glycan composition

IUPAC condensed

GlycoCT

RES
1b:x-dgal-HEX-1:5
2b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d
3s:n-acetyl
4b:b-dgal-HEX-1:5
5s:n-acetyl
6b:b-dgal-HEX-1:5
7b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d
8s:n-acetyl
9b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d
10s:n-acetyl
LIN
1:1o(3+2)2d
2:2d(5+1)3n
3:1o(4+1)4d
4:4d(2+1)5n
5:4o(3+1)6d
6:6o(3+2)7d
7:7d(5+1)8n
8:7o(8+2)9d
9:9d(5+1)10n

PubMed DOI RCSB.ORG PDBeGlyTouCan (glycan information)SwissModel (ligand interactions)Glyconnect and SugarBind glycan superstructure(s)Uniprot

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