3nxd.1 | SWISS-MODEL Template Library

SMTL ID : 3nxd.1 (1 other biounit)

JC polyomavirus VP1 in complex with LSTc

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.00 Å
Oligo State
homo-pentamer
Ligands
2 x BGC- GAL- NAG- GAL- SIA: N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose(Non-functional Binders)
5 x GOL: GLYCEROL(Non-functional Binders)
6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Neu, U. et al., Structure-function analysis of the human JC polyomavirus establishes the LSTc pentasaccharide as a functional receptor motif. Cell Host Microbe (2010)
Release Date
2010-11-17
Peptides
Major capsid protein VP1: ABCDE
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
C
B
B
C
A
D
D
E
E

Major capsid protein VP1

Toggle Identical (AD) Toggle Identical (BE)

Related Entries With Identical Sequence

3nxd.2 | 3nxg.1 | 3nxg.2 | 4x14.1 | 4x15.1 | 4x16.1 | 4x17.1