SMTL ID : 4ndu.1

Crystal structure of L. decastes alpha-galactosyl-binding lectin in complex with alpha-methylgalactoside

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

homo-dimer

Ligands

2 x AMG: methyl alpha-D-galactopyranoside(Non-covalent)

AMG.1: 7 residues within 4Å: Chain A: N.6, F.13, H.69, G.70, Q.71, S.72, N.73 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:N.6, A:H.69, A:G.70, A:G.70, A:S.72, A:S.72 Water bridges: A:N.6 AMG.2: 7 residues within 4Å: Chain B: N.6, F.13, H.69, G.70, Q.71, S.72, N.73 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:N.6, B:H.69, B:G.70, B:G.70, B:S.72, B:S.72

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

van Eerde, A. et al., Atomic-resolution structure of the alpha-galactosyl binding Lyophyllum decastes lectin reveals a new protein family found in both fungi and plants. Glycobiology (2015)

Release Date

2014-12-10

Peptides

Alpha-galactosyl-binding lectin: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Alpha-galactosyl-binding lectin

Related Entries With Identical Sequence