- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.35 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)
- 2 x CA: CALCIUM ION(Non-functional Binders)(Non-covalent)
- 5 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)
IPA.4: 5 residues within 4Å:- Chain A: G.164, L.165, L.166, Y.187, W.202
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:L.166, A:Y.187, A:W.202, A:W.202
- Hydrogen bonds: A:L.165, A:L.165
IPA.5: 5 residues within 4Å:- Chain A: G.121, K.122, L.123, F.143, F.159
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:L.123, A:F.143, A:F.143, A:F.159, A:F.159
- Hydrogen bonds: A:K.122
IPA.8: 5 residues within 4Å:- Chain B: G.8, N.9, L.10, F.30, F.37
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:L.10, B:F.30
- Hydrogen bonds: B:N.9
IPA.9: 5 residues within 4Å:- Chain B: G.164, L.165, L.166, Y.187, W.202
5 PLIP interactions:5 interactions with chain B- Hydrophobic interactions: B:L.166, B:Y.187, B:W.202, B:W.202
- Hydrogen bonds: B:L.165
IPA.10: 4 residues within 4Å:- Chain B: L.1, M.205, L.236, T.237
7 PLIP interactions:7 interactions with chain B- Hydrophobic interactions: B:L.1, B:L.1, B:M.205, B:L.236
- Hydrogen bonds: B:L.1, B:T.237, B:T.237
- 3 x GOL: GLYCEROL(Post Translational Modification)(Non-functional Binders)
GOL.6: 5 residues within 4Å:- Chain A: G.42, S.43, N.58, F.64, F.71
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:S.43, A:N.58
- Water bridges: A:S.41, A:S.43
GOL.11: 6 residues within 4Å:- Chain B: G.42, S.43, L.44, N.58, F.64, F.71
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:S.43, B:S.43, B:N.58
GOL.12: 5 residues within 4Å:- Chain B: G.121, K.122, N.137, F.143, F.159
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:K.122, B:N.137
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Capaldi, S. et al., Three-dimensional structure and ligand-binding site of carp fishelectin (FEL). Acta Crystallogr.,Sect.D (2015)
- Release Date
- 2015-04-08
- Peptides
- Fish-egg lectin: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.35 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)
- 2 x CA: CALCIUM ION(Non-functional Binders)(Non-covalent)
- 5 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)
- 3 x GOL: GLYCEROL(Post Translational Modification)(Non-functional Binders)
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Capaldi, S. et al., Three-dimensional structure and ligand-binding site of carp fishelectin (FEL). Acta Crystallogr.,Sect.D (2015)
- Release Date
- 2015-04-08
- Peptides
- Fish-egg lectin: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B