- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.40 Å
- Oligo State
- homo-pentamer
- Ligands
- 4 x NDG- GAL- FUC- A2G- FUC: alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-alpha-D-glucopyranose(Non-functional Binders)(Non-covalent)
- 2 x PEG: DI(HYDROXYETHYL)ETHER(Non-covalent)
- 3 x GAL: beta-D-galactopyranose(Non-covalent)(Non-functional Binders)
GAL.6: 7 residues within 4Å:- Chain A: E.51, Q.56, H.57, Q.61, W.88, N.90, K.91
8 PLIP interactions:8 interactions with chain A- Hydrogen bonds: A:Q.56, A:Q.61, A:Q.61, A:N.90, A:N.90, A:K.91
- Water bridges: A:W.88
- Salt bridges: A:K.91
GAL.10: 7 residues within 4Å:- Chain C: E.51, Q.56, H.57, Q.61, W.88, N.90, K.91
7 PLIP interactions:7 interactions with chain C- Hydrogen bonds: C:Q.56, C:Q.61, C:Q.61, C:N.90, C:N.90, C:K.91
- Salt bridges: C:K.91
GAL.14: 8 residues within 4Å:- Chain E: E.51, Q.56, H.57, Q.61, W.88, N.90, K.91
- Ligands: GLA.15
9 PLIP interactions:9 interactions with chain E- Hydrogen bonds: E:Q.56, E:Q.61, E:Q.61, E:N.90, E:N.90, E:K.91
- Water bridges: E:W.88, E:K.91
- Salt bridges: E:K.91
- 1 x NA: SODIUM ION(Non-covalent)
- 1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-functional Binders)
- 3 x PGE: TRIETHYLENE GLYCOL(Non-covalent)
PGE.9: 6 residues within 4Å:- Chain C: F.25, T.41, F.42, K.43, G.45
- Ligands: NDG-GAL-FUC-A2G-FUC.2
No protein-ligand interaction detected (PLIP)PGE.12: 5 residues within 4Å:- Chain D: F.25, T.41, F.42, K.43, G.45
No protein-ligand interaction detected (PLIP)PGE.13: 6 residues within 4Å:- Chain E: F.25, T.41, F.42, K.43, G.45
- Ligands: NDG-GAL-FUC-A2G-FUC.4
No protein-ligand interaction detected (PLIP)- 1 x GLA: alpha-D-galactopyranose(Non-covalent)
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Heggelund, J.E. et al., High-Resolution Crystal Structures Elucidate the Molecular Basis of Cholera Blood Group Dependence. Plos Pathog. (2016)
- Release Date
- 2016-03-30
- Peptides
- Cholera enterotoxin B subunit: ABCDE
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
E
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.40 Å
- Oligo State
- homo-pentamer
- Ligands
- 4 x NDG- GAL- FUC- A2G- FUC: alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-alpha-D-glucopyranose(Non-functional Binders)(Non-covalent)
- 2 x PEG: DI(HYDROXYETHYL)ETHER(Non-covalent)
- 3 x GAL: beta-D-galactopyranose(Non-covalent)(Non-functional Binders)
- 1 x NA: SODIUM ION(Non-covalent)
- 1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-functional Binders)
- 3 x PGE: TRIETHYLENE GLYCOL(Non-covalent)
- 1 x GLA: alpha-D-galactopyranose(Non-covalent)
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Heggelund, J.E. et al., High-Resolution Crystal Structures Elucidate the Molecular Basis of Cholera Blood Group Dependence. Plos Pathog. (2016)
- Release Date
- 2016-03-30
- Peptides
- Cholera enterotoxin B subunit: ABCDE
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
E