- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.20 Å
- Oligo State
- hetero-3-3-mer
- Ligands
- 3 x NAG- NAG- MAN: alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)(Post Translational Modification)
- 3 x SIA: N-acetyl-alpha-neuraminic acid(Post Translational Modification)
SIA.4: 11 residues within 4Å:- Chain A: Y.98, G.135, S.136, N.137, W.153, T.155, H.183, E.190, L.194, L.226, S.228
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:W.153, A:T.155
- Hydrogen bonds: A:G.135, A:N.137, A:E.190, A:S.228
SIA.9: 11 residues within 4Å:- Chain C: Y.98, G.135, S.136, N.137, W.153, T.155, H.183, E.190, L.194, L.226, S.228
7 PLIP interactions:7 interactions with chain C- Hydrophobic interactions: C:W.153, C:T.155
- Hydrogen bonds: C:Y.98, C:G.135, C:N.137, C:E.190, C:S.228
SIA.14: 11 residues within 4Å:- Chain E: Y.98, G.135, S.136, N.137, W.153, T.155, H.183, E.190, L.194, L.226, S.228
7 PLIP interactions:7 interactions with chain E- Hydrophobic interactions: E:W.153, E:T.155
- Hydrogen bonds: E:Y.98, E:G.135, E:N.137, E:E.190, E:S.228
- 12 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)
NAG.5: 4 residues within 4Å:- Chain A: N.38, A.39, T.318
- Chain B: L.52
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.38
NAG.6: 4 residues within 4Å:- Chain A: Q.80, N.81, F.120, I.121
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.81
NAG.7: 4 residues within 4Å:- Chain A: S.45, N.285, V.297, N.298
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:N.285, A:V.297, A:N.298
NAG.8: 5 residues within 4Å:- Chain B: A.147, E.150, S.151, N.154, T.156
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:E.150
NAG.10: 3 residues within 4Å:- Chain C: N.38, T.318
- Chain D: L.52
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:N.38
NAG.11: 4 residues within 4Å:- Chain C: Q.80, N.81, F.120, I.121
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:N.81
NAG.12: 4 residues within 4Å:- Chain C: S.45, N.285, V.297, N.298
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:N.285, C:V.297, C:N.298
NAG.13: 5 residues within 4Å:- Chain D: A.147, E.150, S.151, N.154, T.156
1 PLIP interactions:1 interactions with chain D- Hydrogen bonds: D:E.150
NAG.15: 3 residues within 4Å:- Chain E: N.38, T.318
- Chain F: L.52
2 PLIP interactions:2 interactions with chain E- Hydrogen bonds: E:N.38, E:T.318
NAG.16: 4 residues within 4Å:- Chain E: Q.80, N.81, F.120, I.121
1 PLIP interactions:1 interactions with chain E- Hydrogen bonds: E:N.81
NAG.17: 4 residues within 4Å:- Chain E: S.45, N.285, V.297, N.298
3 PLIP interactions:3 interactions with chain E- Hydrogen bonds: E:N.285, E:V.297, E:N.298
NAG.18: 5 residues within 4Å:- Chain F: A.147, E.150, S.151, N.154, T.156
1 PLIP interactions:1 interactions with chain F- Hydrogen bonds: F:E.150
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Weis, W.I. et al., Refinement of the influenza virus hemagglutinin by simulated annealing. J.Mol.Biol. (1990)
- Release Date
- 1991-01-15
- Peptides
- Hemagglutinin HA1 chain: ACE
Hemagglutinin HA2 chain: BDF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
CE
EB
BD
DF
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.20 Å
- Oligo State
- hetero-3-3-mer
- Ligands
- 3 x NAG- NAG- MAN: alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)(Post Translational Modification)
- 3 x SIA: N-acetyl-alpha-neuraminic acid(Post Translational Modification)
- 12 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Weis, W.I. et al., Refinement of the influenza virus hemagglutinin by simulated annealing. J.Mol.Biol. (1990)
- Release Date
- 1991-01-15
- Peptides
- Hemagglutinin HA1 chain: ACE
Hemagglutinin HA2 chain: BDF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
CE
EB
BD
DF
F