- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.89 Å
- Oligo State
- homo-dimer
- Ligands
- 1 x GAL- SIA: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose(Non-covalent)
- 7 x CA: CALCIUM ION(Non-covalent)(Non-functional Binders)
- 3 x ACT: ACETATE ION(Non-functional Binders)(Non-covalent)
ACT.5: 5 residues within 4Å:- Chain A: T.169, V.170
- Chain B: R.167, T.169
- Ligands: ACT.11
6 PLIP interactions:4 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:V.170
- Water bridges: A:K.148, A:K.148, A:V.170, B:R.167
- Salt bridges: B:R.167
ACT.6: 3 residues within 4Å:- Chain A: P.49, L.50, G.51
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:L.50, A:G.51
- Water bridges: A:L.52, A:N.53
ACT.11: 6 residues within 4Å:- Chain A: R.167, T.169
- Chain B: K.148, T.169, V.170
- Ligands: ACT.5
4 PLIP interactions:2 interactions with chain A, 2 interactions with chain B- Water bridges: A:R.167, B:K.148
- Salt bridges: A:R.167
- Hydrogen bonds: B:V.170
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Loukachevitch, L.V. et al., Structures of the Streptococcus sanguinis SrpA Binding Region with Human Sialoglycans Suggest Features of the Physiological Ligand. Biochemistry (2016)
- Release Date
- 2017-02-08
- Peptides
- Platelet-binding glycoprotein: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.89 Å
- Oligo State
- homo-dimer
- Ligands
- 1 x GAL- SIA: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose(Non-covalent)
- 7 x CA: CALCIUM ION(Non-covalent)(Non-functional Binders)
- 3 x ACT: ACETATE ION(Non-functional Binders)(Non-covalent)
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Loukachevitch, L.V. et al., Structures of the Streptococcus sanguinis SrpA Binding Region with Human Sialoglycans Suggest Features of the Physiological Ligand. Biochemistry (2016)
- Release Date
- 2017-02-08
- Peptides
- Platelet-binding glycoprotein: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B