- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x CA: CALCIUM ION(Non-covalent)
- 18 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 4 residues within 4Å:- Chain A: G.61, S.114
- Chain C: K.27, F.35
Ligand excluded by PLIPGOL.3: 7 residues within 4Å:- Chain A: Y.21, S.23, R.24, T.25, K.27, F.35
- Chain B: D.60
Ligand excluded by PLIPGOL.4: 3 residues within 4Å:- Chain A: N.104, N.105, H.107
Ligand excluded by PLIPGOL.5: 7 residues within 4Å:- Chain A: N.110, R.112, N.120, G.122, N.126, F.128
- Ligands: BGC.9
Ligand excluded by PLIPGOL.6: 7 residues within 4Å:- Chain A: W.77, F.85, K.87, S.90, R.91, W.94, P.99
Ligand excluded by PLIPGOL.7: 5 residues within 4Å:- Chain A: R.10, S.38, R.39, R.134
- Chain B: K.57
Ligand excluded by PLIPGOL.11: 4 residues within 4Å:- Chain A: K.27, F.35
- Chain B: G.61, S.114
Ligand excluded by PLIPGOL.12: 7 residues within 4Å:- Chain B: Y.21, S.23, R.24, T.25, K.27, F.35
- Chain C: D.60
Ligand excluded by PLIPGOL.13: 3 residues within 4Å:- Chain B: N.104, N.105, H.107
Ligand excluded by PLIPGOL.14: 7 residues within 4Å:- Chain B: N.110, R.112, N.120, G.122, N.126, F.128
- Ligands: BGC.18
Ligand excluded by PLIPGOL.15: 7 residues within 4Å:- Chain B: W.77, F.85, K.87, S.90, R.91, W.94, P.99
Ligand excluded by PLIPGOL.16: 5 residues within 4Å:- Chain B: R.10, S.38, R.39, R.134
- Chain C: K.57
Ligand excluded by PLIPGOL.20: 4 residues within 4Å:- Chain B: K.27, F.35
- Chain C: G.61, S.114
Ligand excluded by PLIPGOL.21: 7 residues within 4Å:- Chain A: D.60
- Chain C: Y.21, S.23, R.24, T.25, K.27, F.35
Ligand excluded by PLIPGOL.22: 3 residues within 4Å:- Chain C: N.104, N.105, H.107
Ligand excluded by PLIPGOL.23: 7 residues within 4Å:- Chain C: N.110, R.112, N.120, G.122, N.126, F.128
- Ligands: BGC.27
Ligand excluded by PLIPGOL.24: 7 residues within 4Å:- Chain C: W.77, F.85, K.87, S.90, R.91, W.94, P.99
Ligand excluded by PLIPGOL.25: 5 residues within 4Å:- Chain A: K.57
- Chain C: R.10, S.38, R.39, R.134
Ligand excluded by PLIP- 3 x P6G: HEXAETHYLENE GLYCOL(Non-functional Binders)
P6G.8: 3 residues within 4Å:- Chain A: N.126, T.127, F.128
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:N.126, A:T.127
- Water bridges: A:N.126
P6G.17: 3 residues within 4Å:- Chain B: N.126, T.127, F.128
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:N.126, B:T.127
- Water bridges: B:N.126
P6G.26: 3 residues within 4Å:- Chain C: N.126, T.127, F.128
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:N.126, C:T.127
- Water bridges: C:N.126
- 3 x BGC: beta-D-glucopyranose(Non-covalent)
BGC.9: 8 residues within 4Å:- Chain A: E.98, N.100, E.106, R.112, N.120, D.121
- Ligands: CA.1, GOL.5
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:E.98, A:N.100, A:R.112, A:R.112, A:N.120
- Water bridges: A:E.106, A:N.126
BGC.18: 8 residues within 4Å:- Chain B: E.98, N.100, E.106, R.112, N.120, D.121
- Ligands: CA.10, GOL.14
10 PLIP interactions:10 interactions with chain B- Hydrogen bonds: B:E.98, B:N.100, B:R.112, B:R.112, B:N.120
- Water bridges: B:E.98, B:E.98, B:E.106, B:E.106, B:N.126
BGC.27: 8 residues within 4Å:- Chain C: E.98, N.100, E.106, R.112, N.120, D.121
- Ligands: CA.19, GOL.23
11 PLIP interactions:11 interactions with chain C- Hydrogen bonds: C:E.98, C:N.100, C:R.112, C:R.112, C:N.120, C:N.120
- Water bridges: C:E.98, C:E.98, C:E.106, C:E.106, C:N.126
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
-
Hanske, J. et al., Bacterial Polysaccharide Specificity of the Pattern Recognition Receptor Langerin Is Highly Species-dependent. J. Biol. Chem. (2017)
- Release Date
- 2016-12-07
- Peptides
- C-type lectin domain family 4 member K: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x CA: CALCIUM ION(Non-covalent)
- 18 x GOL: GLYCEROL(Non-functional Binders)
- 3 x P6G: HEXAETHYLENE GLYCOL(Non-functional Binders)
- 3 x BGC: beta-D-glucopyranose(Non-covalent)
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
-
Hanske, J. et al., Bacterial Polysaccharide Specificity of the Pattern Recognition Receptor Langerin Is Highly Species-dependent. J. Biol. Chem. (2017)
- Release Date
- 2016-12-07
- Peptides
- C-type lectin domain family 4 member K: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A