- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x MFU: methyl alpha-L-fucopyranoside(Non-covalent)
- 8 x NA: SODIUM ION(Non-functional Binders)
NA.3: 2 residues within 4Å:- Chain A: T.178, V.179
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:T.178, A:T.178, A:V.179
- Water bridges: A:I.131
NA.4: 1 residues within 4Å:- Chain A: K.81
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:K.81, A:K.81
- Water bridges: A:E.31
NA.5: 2 residues within 4Å:- Chain A: T.38, D.40
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:T.38, A:T.38
- Water bridges: A:D.40, A:E.44
NA.6: 2 residues within 4Å:- Chain A: N.37, T.38
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.37
NA.17: 2 residues within 4Å:- Chain B: T.178, V.179
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:V.179, B:V.179
- Water bridges: B:I.131
NA.18: 1 residues within 4Å:- Chain B: K.81
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:K.81, B:K.81
NA.19: 2 residues within 4Å:- Chain B: T.38, D.40
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:D.40
- Water bridges: B:D.40
NA.20: 2 residues within 4Å:- Chain B: N.37, T.38
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:N.37
- 16 x CL: CHLORIDE ION(Non-functional Binders)
CL.7: 3 residues within 4Å:- Chain A: T.178, V.226, V.227
Ligand excluded by PLIPCL.8: 1 residues within 4Å:- Chain A: P.67
Ligand excluded by PLIPCL.9: 6 residues within 4Å:- Chain A: G.49, T.50, D.51, K.52, A.53, W.55
Ligand excluded by PLIPCL.10: 2 residues within 4Å:- Chain A: N.117, W.118
Ligand excluded by PLIPCL.11: 2 residues within 4Å:- Chain A: S.309, W.310
Ligand excluded by PLIPCL.12: 3 residues within 4Å:- Chain A: R.336, I.363, D.364
Ligand excluded by PLIPCL.13: 2 residues within 4Å:- Chain A: E.215, S.216
Ligand excluded by PLIPCL.14: 3 residues within 4Å:- Chain A: N.281
- Chain B: N.37, A.327
Ligand excluded by PLIPCL.21: 3 residues within 4Å:- Chain B: T.178, V.226, V.227
Ligand excluded by PLIPCL.22: 1 residues within 4Å:- Chain B: P.67
Ligand excluded by PLIPCL.23: 6 residues within 4Å:- Chain B: G.49, T.50, D.51, K.52, A.53, W.55
Ligand excluded by PLIPCL.24: 2 residues within 4Å:- Chain B: N.117, W.118
Ligand excluded by PLIPCL.25: 2 residues within 4Å:- Chain B: S.309, W.310
Ligand excluded by PLIPCL.26: 3 residues within 4Å:- Chain B: R.336, I.363, D.364
Ligand excluded by PLIPCL.27: 2 residues within 4Å:- Chain B: E.215, S.216
Ligand excluded by PLIPCL.28: 3 residues within 4Å:- Chain A: N.37, A.327
- Chain B: N.281
Ligand excluded by PLIP- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Jancarikova, G. et al., Characterization of novel bangle lectin from Photorhabdus asymbiotica with dual sugar-binding specificity and its effect on host immunity. PLoS Pathog. (2017)
- Release Date
- 2017-08-09
- Peptides
- Photorhabdus asymbiotica lectin PHL: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x MFU: methyl alpha-L-fucopyranoside(Non-covalent)
- 8 x NA: SODIUM ION(Non-functional Binders)
- 16 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Jancarikova, G. et al., Characterization of novel bangle lectin from Photorhabdus asymbiotica with dual sugar-binding specificity and its effect on host immunity. PLoS Pathog. (2017)
- Release Date
- 2017-08-09
- Peptides
- Photorhabdus asymbiotica lectin PHL: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A