6gvr.1 | SWISS-MODEL Template Library

SMTL ID : 6gvr.1

TAILSPIKE PROTEIN MUTANT E372Q (DELTA N471/S472) OF E. COLI BACTERIOPHAGE HK620 IN COMPLEX WITH PENTASACCHARIDE

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.85 Å
Oligo State
homo-trimer
Ligands
3 x NDG- GLA- GLC- RAM- NAG: alpha-L-rhamnopyranose-(1-6)-alpha-D-glucopyranose-(1-4)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)]alpha-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-glucopyranose(Non-covalent)(Non-functional Binders)
3 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-covalent)(Non-functional Binders)
12 x FMT: FORMIC ACID(Non-covalent)(Non-functional Binders)
6 x NA: SODIUM ION(Non-functional Binders)(Non-covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Kunstmann, S. et al., Solvent Networks Tune Thermodynamics of Oligosaccharide Complex Formation in an Extended Protein Binding Site. J. Am. Chem. Soc. (2018)
Release Date
2018-07-11
Peptides
Tail spike protein: ABC
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
A
C
A

Tail spike protein

Toggle Identical (ABC)