6vgf.1 | SWISS-MODEL Template Library

SMTL ID : 6vgf.1

Peanut lectin complexed with divalent S-beta-D-thiogalactopyranosyl beta-D-glucopyranoside derivative (diSTGD)

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.83 Å
Oligo State
homo-tetramer
Ligands
4 x WA3: (2S,3R,4S,5R,6S)-2-(hydroxymethyl)-6-{[(2S,3R,4S,5S,6S)-3,4,5-trihydroxy-6-({[(1-{[(2R,3S,4S,5R,6R)-3,4,5-trihydroxy-6-{[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-({4-[({[(2S,3S,4S,5R,6S)-3,4,5-trihydroxy-6-{[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl]sulfanyl}tetrahydro-2H-pyran-2-yl]methyl}sulfanyl)methyl]-1H-1,2,3-triazol-1-yl}methyl)tetrahydro-2H-pyran-2-yl]oxy}tetrahydro-2H-pyran-2-yl]methyl}-1H-1,2,3-triazol-4-yl)methyl]sulfanyl}methyl)tetrahydro-2H-pyran-2-yl]sulfanyl}tetrahydro-2H-pyran-3,4,5-triol
4 x MN: MANGANESE (II) ION
4 x CA: CALCIUM ION
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Cagnoni, A.J. et al., Crystal structures of peanut lectin in the presence of synthetic beta-N- and beta-S-galactosides disclose evidence for the recognition of different glycomimetic ligands. Acta Crystallogr D Struct Biol (2020)
Release Date
2020-10-28
Peptides
Galactose-binding lectin: ABCD
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D

Galactose-binding lectin

Toggle Identical (ABCD)

Related Entries With Identical Sequence

1ciw.1 | 1cq9.1 | 1cr7.1 | 1cr7.2 | 1qf3.1 | 1rir.1 | 1rit.1 | 2dv9.1 | 2dva.1 | 2dvb.1 | 2dvd.1 | 2dvf.1 | 2dvg.1 | 2pel.1 | 2tep.1 | 6v95.1 | 6vav.1 | 6vaw.1 | 6vc3.1 | 6vc4.1