- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.20 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x FUC: alpha-L-fucopyranose(Non-covalent)
- 4 x FUL: beta-L-fucopyranose(Non-covalent)
FUL.2: 6 residues within 4Å:- Chain A: R.151, E.163, A.176, P.201, W.219, W.224
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:P.201, A:W.219
- Hydrogen bonds: A:E.163
- Salt bridges: A:R.151
FUL.3: 10 residues within 4Å:- Chain A: R.193, R.204, E.216, R.225, G.227, Q.228, F.229, N.269, W.273
- Ligands: FUC.4
10 PLIP interactions:10 interactions with chain A- Hydrogen bonds: A:E.216, A:Q.228, A:F.229
- Water bridges: A:R.204, A:R.225, A:R.225, A:R.225, A:R.225
- Salt bridges: A:R.204, A:R.225
FUL.8: 6 residues within 4Å:- Chain B: R.151, E.163, A.176, P.201, W.219, W.224
5 PLIP interactions:5 interactions with chain B- Hydrophobic interactions: B:P.201, B:W.219
- Hydrogen bonds: B:E.163
- Water bridges: B:W.224
- Salt bridges: B:R.151
FUL.9: 11 residues within 4Å:- Chain B: R.193, R.204, E.216, V.218, R.225, G.227, Q.228, F.229, N.269, W.273
- Ligands: FUC.10
10 PLIP interactions:10 interactions with chain B- Hydrogen bonds: B:E.216, B:Q.228, B:F.229
- Water bridges: B:R.204, B:R.204, B:R.225, B:R.225, B:R.225
- Salt bridges: B:R.204, B:R.225
- 4 x GOL: GLYCEROL(Non-functional Binders)
GOL.5: 6 residues within 4Å:- Chain A: N.49, W.65, R.304, E.316, I.318, R.320
9 PLIP interactions:9 interactions with chain A- Hydrogen bonds: A:N.49, A:R.304, A:R.304
- Water bridges: A:G.46, A:W.69, A:E.316, A:E.316, A:R.320, A:H.329
GOL.6: 8 residues within 4Å:- Chain A: Q.228, F.229, V.230, I.231, S.267, W.273, K.274, P.276
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:Q.228, A:V.230, A:V.230, A:K.274
GOL.11: 5 residues within 4Å:- Chain B: N.49, W.65, R.304, E.316, I.318
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:N.49, B:R.304, B:Y.306, B:Y.306, B:R.320
- Water bridges: B:G.46, B:W.69, B:E.316
GOL.12: 8 residues within 4Å:- Chain B: Q.228, F.229, V.230, I.231, S.267, W.273, K.274, P.276
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:Q.228, B:V.230, B:V.230, B:S.267, B:K.274
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Liu, M. et al., Structural insights into the fungi-nematodes interaction mediated by fucose-specific lectin AofleA from Arthrobotrys oligospora. Int.J.Biol.Macromol. (2020)
- Release Date
- 2020-07-29
- Peptides
- AofleA: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.20 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x FUC: alpha-L-fucopyranose(Non-covalent)
- 4 x FUL: beta-L-fucopyranose(Non-covalent)
- 4 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Liu, M. et al., Structural insights into the fungi-nematodes interaction mediated by fucose-specific lectin AofleA from Arthrobotrys oligospora. Int.J.Biol.Macromol. (2020)
- Release Date
- 2020-07-29
- Peptides
- AofleA: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B