8opm.1 | SWISS-MODEL Template Library

SMTL ID : 8opm.1

Human Coronavirus HKU1 spike glycoprotein in complex with an alpha2,8-linked 9-O-acetylated disialoside (closed state)

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
homo-trimer
Ligands
12 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
21 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
3 x SIA- 5N6: 9-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosonic acid-(2-8)-N-acetyl-alpha-neuraminic acid(Non-covalent)
30 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Pronker, M.F. et al., Sialoglycan binding triggers spike opening in a human coronavirus. Nature (2023)
Release Date
2023-08-02
Peptides
Spike glycoprotein,General control transcription factor GCN4: ABC
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C

Spike glycoprotein,General control transcription factor GCN4

Toggle Identical (ABC)

Related Entries With Identical Sequence

8ohn.1 | 8opn.1 | 8opo.1