- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 1 x NAG- FUL- NAG: beta-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-functional Binders)
- 2 x BGC- GAL: beta-D-galactopyranose-(1-4)-beta-D-glucopyranose(Non-functional Binders)
- 2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-functional Binders)(Non-covalent)
NAG.5: 6 residues within 4Å:- Chain A: K.90, D.91, N.112, S.114, D.117, R.120
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:K.90, A:S.114, A:S.114
NAG.21: 3 residues within 4Å:- Chain B: W.94, N.96, L.228
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:N.96
- Water bridges: B:G.95, B:N.96, B:L.228
- 16 x GOL: GLYCEROL(Non-functional Binders)(Non-covalent)
GOL.6: 7 residues within 4Å:- Chain A: T.13, G.14, A.15, R.177, N.181
- Chain B: R.149
- Ligands: GOL.28
Ligand excluded by PLIPGOL.8: 3 residues within 4Å:- Chain A: Q.178, S.182, A.184
Ligand excluded by PLIPGOL.10: 5 residues within 4Å:- Chain A: F.18, W.174, R.177
- Chain B: D.150
- Ligands: GOL.28
Ligand excluded by PLIPGOL.12: 4 residues within 4Å:- Chain A: G.63, D.64, S.65, R.143
Ligand excluded by PLIPGOL.13: 7 residues within 4Å:- Chain A: R.234, D.235
- Chain B: R.141, L.176, F.219, P.261
- Ligands: GOL.25
Ligand excluded by PLIPGOL.14: 7 residues within 4Å:- Chain A: P.171, W.174, R.175, Q.178
- Chain B: Y.146, D.150, V.262
Ligand excluded by PLIPGOL.15: 7 residues within 4Å:- Chain A: R.175, D.189, Y.191, L.222, P.223
- Chain B: Y.146, P.263
Ligand excluded by PLIPGOL.16: 5 residues within 4Å:- Chain A: A.94, G.95, A.96, E.97, T.98
Ligand excluded by PLIPGOL.22: 3 residues within 4Å:- Chain B: Q.92, P.102, N.105
Ligand excluded by PLIPGOL.23: 4 residues within 4Å:- Chain B: T.51, K.53, R.59, G.62
Ligand excluded by PLIPGOL.24: 2 residues within 4Å:- Chain B: R.59, N.82
Ligand excluded by PLIPGOL.25: 9 residues within 4Å:- Chain A: R.234, D.235
- Chain B: L.133, R.141, L.176, Y.177, G.178
- Ligands: GOL.13, GOL.26
Ligand excluded by PLIPGOL.26: 8 residues within 4Å:- Chain A: R.234, I.237
- Chain B: G.95, N.96, W.217, V.218, F.219
- Ligands: GOL.25
Ligand excluded by PLIPGOL.27: 4 residues within 4Å:- Chain B: T.66, F.79, A.84, V.85
Ligand excluded by PLIPGOL.28: 8 residues within 4Å:- Chain A: R.177
- Chain B: F.148, R.149, D.150, P.255, M.258
- Ligands: GOL.6, GOL.10
Ligand excluded by PLIPGOL.29: 4 residues within 4Å:- Chain B: E.142, E.170, R.173, K.185
Ligand excluded by PLIP- 3 x CL: CHLORIDE ION(Non-functional Binders)
- 1 x DIO: 1,4-DIETHYLENE DIOXIDE
- 3 x SO4: SULFATE ION(Post Translational Modification)(Non-covalent)
SO4.18: 5 residues within 4Å:- Chain A: E.119, H.124, R.125, D.126
- Ligands: DIO.17
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:R.125, A:D.126
- Water bridges: A:D.126
- Salt bridges: A:H.124, A:R.125
SO4.19: 3 residues within 4Å:- Chain A: S.30, R.41, Q.42
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:Q.42, A:Q.42
- Salt bridges: A:R.41
SO4.20: 3 residues within 4Å:- Chain A: S.148, T.149, R.150
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:T.149, A:R.150
- Water bridges: A:S.148
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Mikeska, R. et al., Mistletoe lectin I in complex with galactose and lactose reveals distinct sugar-binding properties. Acta Crystallogr.,Sect.F (2005)
- Release Date
- 2004-06-25
- Peptides
- lectin I A chain: A
lectin I B chain: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 1 x NAG- FUL- NAG: beta-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-functional Binders)
- 2 x BGC- GAL: beta-D-galactopyranose-(1-4)-beta-D-glucopyranose(Non-functional Binders)
- 2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-functional Binders)(Non-covalent)
- 16 x GOL: GLYCEROL(Non-functional Binders)(Non-covalent)
- 3 x CL: CHLORIDE ION(Non-functional Binders)
- 1 x DIO: 1,4-DIETHYLENE DIOXIDE
- 3 x SO4: SULFATE ION(Post Translational Modification)(Non-covalent)
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Mikeska, R. et al., Mistletoe lectin I in complex with galactose and lactose reveals distinct sugar-binding properties. Acta Crystallogr.,Sect.F (2005)
- Release Date
- 2004-06-25
- Peptides
- lectin I A chain: A
lectin I B chain: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B