- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.74 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NGA- GAL: beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose(Non-covalent)
- 2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)
NAG.3: 10 residues within 4Å:- Chain A: D.78, I.79, V.80, T.81, N.82, Y.96, I.101, R.102, Y.113, V.115
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:T.81, A:V.115
- Hydrogen bonds: A:T.81, A:R.102, A:Y.113, A:Y.113
- Salt bridges: A:R.102
NAG.8: 10 residues within 4Å:- Chain C: D.78, I.79, V.80, T.81, N.82, Y.96, I.101, R.102, Y.113, V.115
7 PLIP interactions:7 interactions with chain C- Hydrophobic interactions: C:T.81, C:V.115
- Hydrogen bonds: C:T.81, C:Y.96, C:R.102, C:Y.113
- Salt bridges: C:R.102
- 4 x SER: SERINE(Non-covalent)
SER.4: 3 residues within 4Å:- Chain A: H.71, N.72
- Ligands: NGA-GAL.1
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.72
SER.5: 2 residues within 4Å:- Chain B: N.72
- Ligands: NGA-GAL.2
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:N.72
- Water bridges: B:H.71
SER.9: 3 residues within 4Å:- Chain C: H.71, N.72
- Ligands: NGA-GAL.6
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:N.72
SER.10: 2 residues within 4Å:- Chain D: N.72
- Ligands: NGA-GAL.7
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:N.72
- Water bridges: D:H.71
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Carrizo, M.E. et al., The Antineoplastic Lectin of the Common Edible Mushroom (Agaricus bisporus) Has Two Binding Sites, Each Specific for a Different Configuration at a Single Epimeric Hydroxyl. J.Biol.Chem. (2005)
- Release Date
- 2004-12-21
- Peptides
- lectin: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.74 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NGA- GAL: beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose(Non-covalent)
- 2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)
- 4 x SER: SERINE(Non-covalent)
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Carrizo, M.E. et al., The Antineoplastic Lectin of the Common Edible Mushroom (Agaricus bisporus) Has Two Binding Sites, Each Specific for a Different Configuration at a Single Epimeric Hydroxyl. J.Biol.Chem. (2005)
- Release Date
- 2004-12-21
- Peptides
- lectin: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B