- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAG- GAL: beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)
- 4 x MN: MANGANESE (II) ION(Non-covalent)
MN.2: 6 residues within 4Å:- Chain A: E.124, D.126, W.132, D.133, H.138, S.148
5 PLIP interactions:4 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:E.124, A:D.126, A:D.133, A:H.138, H2O.1
MN.5: 6 residues within 4Å:- Chain B: E.124, D.126, W.132, D.133, H.138, S.148
5 PLIP interactions:4 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:E.124, B:D.126, B:D.133, B:H.138, H2O.2
MN.8: 6 residues within 4Å:- Chain C: E.124, D.126, W.132, D.133, H.138, S.148
5 PLIP interactions:4 interactions with chain C, 1 Ligand-Water interactions- Metal complexes: C:E.124, C:D.126, C:D.133, C:H.138, H2O.3
MN.11: 6 residues within 4Å:- Chain D: E.124, D.126, W.132, D.133, H.138, S.148
5 PLIP interactions:4 interactions with chain D, 1 Ligand-Water interactions- Metal complexes: D:E.124, D:D.126, D:D.133, D:H.138, H2O.4
- 4 x CA: CALCIUM ION(Non-covalent)
CA.3: 4 residues within 4Å:- Chain A: D.126, F.128, N.130, D.133
5 PLIP interactions:3 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:D.126, A:F.128, A:D.133, H2O.1, H2O.1
CA.6: 4 residues within 4Å:- Chain B: D.126, F.128, N.130, D.133
5 PLIP interactions:3 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:D.126, B:F.128, B:D.133, H2O.2, H2O.2
CA.9: 4 residues within 4Å:- Chain C: D.126, F.128, N.130, D.133
5 PLIP interactions:3 interactions with chain C, 2 Ligand-Water interactions- Metal complexes: C:D.126, C:F.128, C:D.133, H2O.3, H2O.3
CA.12: 4 residues within 4Å:- Chain D: D.126, F.128, N.130, D.133
5 PLIP interactions:3 interactions with chain D, 2 Ligand-Water interactions- Metal complexes: D:D.126, D:F.128, D:D.133, H2O.4, H2O.4
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Dessen, A. et al., X-ray crystal structure of the soybean agglutinin cross-linked with a biantennary analog of the blood group I carbohydrate antigen. Biochemistry (1995)
- Release Date
- 1998-12-09
- Peptides
- Lectin: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAG- GAL: beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)
- 4 x MN: MANGANESE (II) ION(Non-covalent)
- 4 x CA: CALCIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Dessen, A. et al., X-ray crystal structure of the soybean agglutinin cross-linked with a biantennary analog of the blood group I carbohydrate antigen. Biochemistry (1995)
- Release Date
- 1998-12-09
- Peptides
- Lectin: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A