- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-pentamer
- Ligands
- 1 x NAG- GAL- SIA: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
- 5 x GOL: GLYCEROL(Non-functional Binders)
- 5 x CL: CHLORIDE ION(Non-functional Binders)
CL.3: 6 residues within 4Å:- Chain A: N.131, H.133, S.215, I.216, Q.217
- Ligands: GOL.2
Ligand excluded by PLIPCL.5: 6 residues within 4Å:- Chain B: N.131, H.133, S.215, I.216, Q.217
- Ligands: GOL.4
Ligand excluded by PLIPCL.7: 6 residues within 4Å:- Chain C: N.131, H.133, S.215, I.216, Q.217
- Ligands: GOL.6
Ligand excluded by PLIPCL.9: 6 residues within 4Å:- Chain D: N.131, H.133, S.215, I.216, Q.217
- Ligands: GOL.8
Ligand excluded by PLIPCL.12: 6 residues within 4Å:- Chain E: N.131, H.133, S.215, I.216, Q.217
- Ligands: GOL.11
Ligand excluded by PLIP- 1 x SIA: N-acetyl-alpha-neuraminic acid(Non-covalent)
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Neu, U. et al., Structures of Merkel Cell Polyomavirus VP1 Complexes Define a Sialic Acid Binding Site Required for Infection. Plos Pathog. (2012)
- Release Date
- 2012-09-05
- Peptides
- VP1: ABCDE
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
E
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-pentamer
- Ligands
- 1 x NAG- GAL- SIA: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
- 5 x GOL: GLYCEROL(Non-functional Binders)
- 5 x CL: CHLORIDE ION(Non-functional Binders)
- 1 x SIA: N-acetyl-alpha-neuraminic acid(Non-covalent)
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Neu, U. et al., Structures of Merkel Cell Polyomavirus VP1 Complexes Define a Sialic Acid Binding Site Required for Infection. Plos Pathog. (2012)
- Release Date
- 2012-09-05
- Peptides
- VP1: ABCDE
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
E