- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.86 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x CA: CALCIUM ION(Non-covalent)
- 4 x LRD: 2-[(E)-(3-chloro-4-hydroxyphenyl)(3-chloro-4-oxocyclohexa-2,5-dien-1-ylidene)methyl]benzenesulfonic acid(Non-covalent)
LRD.2: 6 residues within 4Å:- Chain A: Y.36, P.38, H.50, P.51, Q.53
- Ligands: GAL.3
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Q.53
- Salt bridges: A:H.50
LRD.5: 6 residues within 4Å:- Chain B: Y.36, P.38, H.50, P.51, Q.53
- Ligands: GAL.6
2 PLIP interactions:2 interactions with chain B- Salt bridges: B:H.50
- pi-Cation interactions: B:H.50
LRD.8: 6 residues within 4Å:- Chain C: Y.36, P.38, H.50, P.51, Q.53
- Ligands: GAL.9
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:Q.53
- Salt bridges: C:H.50
- pi-Cation interactions: C:H.50
LRD.11: 6 residues within 4Å:- Chain D: Y.36, P.38, H.50, P.51, Q.53
- Ligands: GAL.12
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:Q.53
- Salt bridges: D:H.50
- pi-Stacking: D:H.50
- 4 x GAL: beta-D-galactopyranose(Non-covalent)
GAL.3: 10 residues within 4Å:- Chain A: Y.36, H.50, Q.53, C.62, D.100, V.101, T.104, N.107
- Ligands: CA.1, LRD.2
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:T.104, A:T.104, A:N.107
- Water bridges: A:Y.36, A:H.50, A:N.107
GAL.6: 9 residues within 4Å:- Chain B: Y.36, H.50, Q.53, D.100, V.101, T.104, N.107
- Ligands: CA.4, LRD.5
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:T.104, B:N.107
- Water bridges: B:H.50
GAL.9: 10 residues within 4Å:- Chain C: Y.36, H.50, Q.53, C.62, D.100, V.101, T.104, N.107
- Ligands: CA.7, LRD.8
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:T.104, C:N.107
- Water bridges: C:H.50, C:Q.53
GAL.12: 8 residues within 4Å:- Chain D: Y.36, H.50, Q.53, D.100, V.101, T.104
- Ligands: CA.10, LRD.11
9 PLIP interactions:9 interactions with chain D- Hydrogen bonds: D:Q.53, D:T.104, D:T.104
- Water bridges: D:H.50, D:T.104, D:N.107, D:N.107, D:N.107, D:N.107
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
- Kadam, R.U. et al., CH-pi "T-Shape" Interaction with Histidine Explains Binding of Aromatic Galactosides to Pseudomonas aeruginosa Lectin LecA. Acs Chem.Biol. (2013)
- Release Date
- 2013-10-30
- Peptides
- PA-I galactophilic lectin: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
FD
G
SMTL ID : 4lk6.1 (2 other biounits)
Crystal Structure of Pseudomonas aeruginosa Lectin LecA Complexed with Chlorophenol Red-b-D-galactopyranoside at 2.86 A Resolution
PA-I galactophilic lectin
Toggle Identical (ABCD)Related Entries With Identical Sequence
1l7l.1 | 1oko.1 | 1uoj.1 | 2vxj.1 | 2vxj.2 | 2vxj.3 | 2vxj.4 | 2vxj.5 | 2vxj.6 | 2vxj.7 | 2vxj.8 | 2vxj.9 | 2vxj.10 | 2vxj.11 | 2vxj.12 | 2vxj.13 | 2vxj.14 | 2vxj.15 | 2vxj.16 | 2vxj.17 | 2vxj.18 | 2vxj.19 | 2vxj.20 | 2vxj.21 | 2vxj.22 | 2vxj.23 | 2vxj.24 | 2wyf.1 | 2wyf.2 | 2wyf.3 more...less...2wyf.4 |
2wyf.5 |
2wyf.6 |
4a6s.1 |
4a6s.2 |
4al9.1 |
4al9.2 |
4cp9.1 |
4cp9.2 |
4cp9.3 |
4cp9.4 |
4cp9.5 |
4cpb.1 |
4cpb.2 |
4cpb.3 |
4lk6.2 |
4lk6.3 |
4lk7.1 |
4lk7.2 |
4lk7.3 |
4lkd.1 |
4lkd.2 |
4lke.1 |
4lkf.1 |
4yw6.1 |
4yw7.1 |
4yw7.2 |
4yw7.3 |
4yw7.4 |
4yw7.5 |
4yw7.6 |
4yw7.7 |
4yw7.8 |
4yw7.9 |
4yw7.10 |
4yw7.11 |
4yw7.12 |
4yw7.13 |
4yw7.14 |
4yw7.15 |
4yw7.16 |
4ywa.1 |
4ywa.2 |
5d21.1 |
5mih.1 |
6yo3.1