5VKI structure in UniLectin3D

Mol* PDB structure viewer

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VP8* domain complexed with core 2 mucin

Liu Y, Xu S, Woodruff A, Xia M, Tan M, Kennedy M, Jiang X. Structural basis of glycan specificity of P[19] VP8*: Implications for rotavirus zoonosis and evolution. PLoS pathogens 2017

Matching protein

A7YCM0 in UniLectin

Available structures

5VKI : bGlcNAc16(bGal13)GalNAc
5VKS : aFuc12bGal13bGlcNAc13bGal14Glc

Related proteins
> 50% identity

Ligand

Glycan composition

IUPAC condensed

GlycoCT

RES
1b:x-dgal-HEX-1:5
2s:n-acetyl
3b:b-dgal-HEX-1:5
4b:b-dglc-HEX-1:5
5s:n-acetyl
LIN
1:1d(2+1)2n
2:1o(3+1)3d
3:1o(6+1)4d
4:4d(2+1)5n

PubMed DOI RCSB.ORG PDBeGlyTouCan (glycan information)SwissModel (ligand interactions)Glyconnect and SugarBind glycan superstructure(s)Uniprot

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